STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16197.1KEGG: dak:DaAHT2_2326 hypothetical protein; SPTR: Putative uncharacterized protein. (57 aa)    
Predicted Functional Partners:
ADW16198.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: dak:DaAHT2_2325 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.752
ADW16199.1
Protein of unknown function DUF1058; COGs: COG3807 conserved hypothetical protein; InterPro IPR003646: IPR010466; KEGG: dak:DaAHT2_2324 protein of unknown function DUF1058; PFAM: protein of unknown function DUF1058; SMART: SH3 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial SH3 domain.
       0.752
ADW16195.1
COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: hor:Hore_23520 chromosome segregation ATPase; SPTR: Chromosome partitioning protein ParA homolog; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
       0.723
ADW16196.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: dak:DaAHT2_2007 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins.
       0.723
ADW16200.1
Biotin biosynthesis protein BioC; COGs: COG4106 Trans-aconitate methyltransferase; InterPro IPR011814: IPR013216; KEGG: plt:Plut_2067 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC.
       0.509
ADW16201.1
COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: cpb:Cphamn1_2454 dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase.
       0.459
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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