STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADW16200.1Biotin biosynthesis protein BioC; COGs: COG4106 Trans-aconitate methyltransferase; InterPro IPR011814: IPR013216; KEGG: plt:Plut_2067 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC. (272 aa)    
Predicted Functional Partners:
ADW16785.1
Protein of unknown function DUF452; COGs: COG2830 conserved hypothetical protein; InterPro IPR007398; KEGG: dps:DP2546 hypothetical protein; PFAM: protein of unknown function DUF452; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF452).
     0.974
ADW16201.1
COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: cpb:Cphamn1_2454 dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase.
 
   
 0.939
fabF
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
     
  0.900
ADW18806.1
Beta-ketoacyl synthase; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR018506: IPR018201: IPR014030: IPR014031; KEGG: dps:DP2403 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: Beta-ketoacyl synthase; SPTR: Related to 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
  0.900
ADW19140.1
COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR018201; KEGG: cja:CJA_0749 beta-ketoacyl-ACP synthase I; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase I; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
  0.900
ADW16786.1
8-amino-7-oxononanoate synthase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004723: IPR004839: IPR001917; KEGG: pph:Ppha_2838 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase.
  
 0.862
ADW16463.1
COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814: IPR005815; KEGG: see:SNSL254_A0857 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase.
 
  
 0.834
ADW16462.1
COGs: COG0502 Biotin synthase; InterPro IPR006638: IPR002684: IPR007197: IPR010722; KEGG: cpu:cpfrc_00908 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase 2; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase.
 
   
 0.654
ADW16198.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: dak:DaAHT2_2325 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.522
ADW16199.1
Protein of unknown function DUF1058; COGs: COG3807 conserved hypothetical protein; InterPro IPR003646: IPR010466; KEGG: dak:DaAHT2_2324 protein of unknown function DUF1058; PFAM: protein of unknown function DUF1058; SMART: SH3 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial SH3 domain.
       0.522
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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