STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16252.1COGs: COG2951 Membrane-bound lytic murein transglycosylase B; InterPro IPR011757; KEGG: mca:MCA2114 murein hydrolase B; SPTR: Membrane-bound lytic transglycosylase B; TIGRFAM: lytic murein transglycosylase B; TIGRFAM: lytic murein transglycosylase B. (380 aa)    
Predicted Functional Partners:
ADW19288.1
Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.572
ADW19105.1
KEGG: noc:Noc_1383 MerR family transcriptional regulator; SPTR: Transcriptional regulator, MerR family.
  
     0.562
ADW16251.1
Na+/Ca+ antiporter, CaCA family; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481: IPR004837; KEGG: cli:Clim_1218 Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; SPTR: K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein.
       0.558
ADW16927.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR017790; KEGG: dps:DP1083 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Probable penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
   
 
 0.551
ADW16248.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR017900: IPR000759: IPR017896: IPR013027; KEGG: dat:HRM2_42770 GltD3; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: GltD3; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
    0.550
ADW16249.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752: IPR002880; KEGG: dat:HRM2_42780 PorA3; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: PorA3; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit.
       0.540
ADW16250.1
2-oxoglutarate synthase; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: dat:HRM2_42790 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; PRIAM: 2-oxoglutarate synthase; SPTR: PorB4; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
       0.540
ADW18734.1
Protein of unknown function DUF490; COGs: COG2911 conserved hypothetical protein; InterPro IPR005829: IPR007452; KEGG: nhl:Nhal_0217 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.509
ADW17565.1
Rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR012997: IPR005132: IPR007730; KEGG: dak:DaAHT2_1328 rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; SPTR: Rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A.
     
 0.494
ADW18733.1
Surface antigen (D15); COGs: COG0729 Outer membrane protein; InterPro IPR010827: IPR000184; KEGG: nhl:Nhal_0216 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen.
  
     0.458
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.