STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16261.1COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175: IPR014051; KEGG: dak:DaAHT2_0011 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; SPTR: 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase. (155 aa)    
Predicted Functional Partners:
ADW16436.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR008265: IPR001087; KEGG: dat:HRM2_23650 putative lipase/hydrolase; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative lipase/hydrolase; PFAM: GDSL-like Lipase/Acylhydrolase.
      0.610
ADW19366.1
Competence/damage-inducible protein cinA; COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR001453: IPR008136: IPR008135; KEGG: dak:DaAHT2_1904 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain.
     
 0.496
ADW16201.1
COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: cpb:Cphamn1_2454 dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase.
  
  
 0.481
ADW16260.1
COGs: COG1166 Arginine decarboxylase (spermidine biosynthesis); InterPro IPR000183: IPR002985; KEGG: dvl:Dvul_2517 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic.
       0.459
ADW16262.1
InterPro IPR013424: IPR011449; KEGG: dba:Dbac_2590 protein of unknown function DUF1555; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: variant PEP-CTERM putative exosortase signal, Roseobacter type; PEP-CTERM putative exosortase interaction domain.
       0.408
ADW18426.1
Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: dak:DaAHT2_0574 protein of unknown function DUF52; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein.
 
     0.400
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.