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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16286.1Hypothetical protein; KEGG: mmu:329207 RNA binding motif protein 44; SPTR: RNA binding motif protein 44. (116 aa)    
Predicted Functional Partners:
ADW16287.1
KEGG: cjd:JJD26997_0840 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.731
ADW16288.1
Metal-dependent phosphohydrolase HD sub domain protein; InterPro IPR006674; KEGG: sat:SYN_01887 metal dependent phosphohydrolases; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Metal dependent phosphohydrolases; PFAM: HD domain.
       0.729
ADW16289.1
COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR000183; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
       0.729
ADW16290.1
KEGG: ppd:Ppro_0194 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.727
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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