STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16342.1TraH family protein; InterPro IPR010927; KEGG: sat:SYN_01874 pilus assembly protein; PFAM: TraH family protein; SPTR: Pilus assembly protein; PFAM: Conjugative relaxosome accessory transposon protein. (477 aa)    
Predicted Functional Partners:
ADW16347.1
TraU family protein; InterPro IPR009649; KEGG: sat:SYN_01869 conjugal DNA transfer protein; PFAM: TraU family protein; SPTR: Conjugal DNA transfer protein; PFAM: TraU protein.
 
   
 0.955
ADW16349.1
Sex pilus assembly protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: sat:SYN_01865 sex pilus assembly protein; SPTR: Sex pilus assembly protein; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC.
 
   
 0.952
ADW16351.1
KEGG: sat:SYN_01863 pilus assembly protein; SPTR: Pilus assembly protein; PFAM: Bacterial conjugation TrbI-like protein.
 
   
 0.951
ADW16348.1
KEGG: sat:SYN_01868 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein.
 
   
 0.949
ADW16343.1
Glutaredoxin 2; InterPro IPR008554; KEGG: ppd:Ppro_0197 glutaredoxin 2; PFAM: glutaredoxin 2; SPTR: Glutaredoxin 2; PFAM: Thioredoxin.
 
     0.948
ADW16344.1
Peptidase S26, conserved region; COGs: COG4959 Type IV secretory pathway protease TraF; InterPro IPR019533; KEGG: ppd:Ppro_0246 type IV secretory protease; PFAM: Peptidase S26, conserved region; SPTR: Type IV secretory protease; PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF.
 
     0.945
ADW16341.1
Hypothetical protein; KEGG: sat:SYN_01875 DNA transfer and F pilus assembly protein; SPTR: DNA transfer and F pilus assembly protein; PFAM: TraG-like protein, N-terminal region.
       0.813
ADW16289.1
COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR000183; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
 
   
 0.809
ADW16346.1
InterPro IPR019106; KEGG: ppd:Ppro_0248 hypothetical protein; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC; SPTR: Putative uncharacterized protein; PFAM: Type-F conjugative transfer system pilin assembly protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC.
     
 0.809
ADW17449.1
TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: TRAG family protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
 
   
 0.809
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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