STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16359.1TrfA family protein; InterPro IPR010751; KEGG: alv:Alvin_3152 replication initiator protein A; PFAM: TrfA family protein; SPTR: Replication initiator protein A; PFAM: TrfA protein. (294 aa)    
Predicted Functional Partners:
ADW16846.1
Thiamine biosynthesis protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR020536; KEGG: dps:DP2965 hypothetical protein; PFAM: Thiamine biosynthesis protein-like; SPTR: Thiamine biosynthesis protein; PFAM: Thiamine biosynthesis protein (ThiI).
  
  
 0.868
ADW16360.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: cdl:CDR20291_0797 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
       0.642
ADW16361.1
Hypothetical protein; KEGG: mdi:METDI1226 putative plasmid maintenance system antidote protein, HTH DNA-binding domain; SPTR: Putative uncharacterized protein.
       0.642
ADW16357.1
KEGG: sat:SYN_01841 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein.
       0.420
ADW16358.1
InterPro IPR014284; KEGG: gsu:GSU2177 hypothetical protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.420
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.