STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16420.1InterPro IPR000477; KEGG: oih:OB1804 recombinase for Bh.Int; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); SPTR: Putative uncharacterized protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase). (508 aa)    
Predicted Functional Partners:
ADW17648.1
CRISPR-associated protein, Cas2 family; COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR021127; KEGG: sat:SYN_02472 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2.
   
 
 0.897
ADW16421.1
Hypothetical protein; KEGG: pmj:P9211_13951 two-component sensor histidine kinase; SPTR: Cag pathogenicity island protein.
       0.516
ADW19202.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR013690: IPR002611: IPR003593; KEGG: psa:PST_0581 ISPsy14, transposition helper protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; SPTR: ISPsy14, transposition helper protein; PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal.
  
     0.465
ADW16422.1
KEGG: shn:Shewana3_2489 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.434
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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