STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16422.1KEGG: shn:Shewana3_2489 hypothetical protein; SPTR: Putative uncharacterized protein. (561 aa)    
Predicted Functional Partners:
ADW16421.1
Hypothetical protein; KEGG: pmj:P9211_13951 two-component sensor histidine kinase; SPTR: Cag pathogenicity island protein.
       0.636
ADW16423.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bah:BAMEG_0663 site-specific tyrosine recombinase XerC; PFAM: integrase family protein; SPTR: Tyrosine recombinase XerC; PFAM: Phage integrase family.
       0.501
ADW16420.1
InterPro IPR000477; KEGG: oih:OB1804 recombinase for Bh.Int; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); SPTR: Putative uncharacterized protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
       0.434
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.