STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16446.1KEGG: pfd:PFDG_00166 predicted protein; SPTR: Phenylacetyl-CoA ligase. (104 aa)    
Predicted Functional Partners:
ADW16447.1
KEGG: vap:Vapar_2243 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADW16444.1
KEGG: dba:Dbac_3165 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: S23 ribosomal protein.
       0.601
ADW16445.1
Protein of unknown function DUF450; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001: IPR007409: IPR006935; KEGG: dze:Dd1591_4250 protein of unknown function DUF450; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: Putative uncharacterized protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
       0.601
ADW16440.1
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR002296: IPR003356; KEGG: dze:Dd1591_4253 N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
       0.482
ADW16441.1
COGs: COG3943 Virulence protein; InterPro IPR011204; KEGG: lch:Lcho_4168 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.482
ADW16442.1
Hypothetical protein; KEGG: mev:Metev_0464 restriction modification system DNA specificity domain-containing protein; SPTR: Restriction modification system DNA specificity domain protein.
       0.482
ADW16443.1
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: hha:Hhal_1153 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Restriction modification system DNA specificity domain; PFAM: Type I restriction modification DNA specificity domain.
       0.482
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.