STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16449.1Transposase-like protein; KEGG: ppd:Ppro_3678 transposase and inactivated derivatives; SPTR: Transposase and inactivated derivatives. (344 aa)    
Predicted Functional Partners:
ADW18600.1
KEGG: dde:Dde_3351 bacteriophage DNA transposition B protein; SPTR: Bacteriophage DNA transposition B protein, putative.
  
 
 0.808
ADW18236.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sat:SYN_00829 cell wall biogenesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase involved in cell wall biogenesis; PFAM: Glycosyl transferase family 2.
  
     0.489
ADW17839.1
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: hit:NTHI0141 transposon Tn3 transposase; PFAM: transposase Tn3 family protein; SPTR: Transposase; PFAM: Transposase.
 
     0.432
ADW16841.1
General secretion pathway protein D; COGs: COG1450 Type II secretory pathway component PulD; InterProIPR005644: IPR004846: IPR001440: IPR001775: IPR 013356: IPR019734: IPR013026; KEGG: dol:Dole_1041 general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: General secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIG [...]
  
     0.404
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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