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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16450.1Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: cpr:CPR_1179 site-specific tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Site-specific recombinase, phage integrase family; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family. (415 aa)    
Predicted Functional Partners:
ADW16423.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bah:BAMEG_0663 site-specific tyrosine recombinase XerC; PFAM: integrase family protein; SPTR: Tyrosine recombinase XerC; PFAM: Phage integrase family.
  
     0.734
ADW18221.1
Na-Ca exchanger/integrin-beta4; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR018247: IPR000209: IPR003644; KEGG: dal:Dalk_4404 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Type 4 fimbrial biogenesis protein PilY1; PFAM: Protein metal binding site; Calx-beta domain.
  
     0.703
ADW16452.1
Hypothetical protein; KEGG: ttr:Tter_2599 NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1018).
       0.685
ADW18229.1
Vitamin K epoxide reductase; COGs: COG4243 membrane protein; InterPro IPR012932: IPR001853; KEGG: dol:Dole_0519 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; DSBA oxidoreductase; SMART: Vitamin K epoxide reductase; SPTR: Vitamin K epoxide reductase; PFAM: DSBA-like thioredoxin domain; Vitamin K epoxide reductase family.
 
    0.674
ADW16451.1
KEGG: tml:GSTUM_00008352001 hypothetical protein; SPTR: Whole genome shotgun sequence assembly, scaffold_45, strain Mel28.
       0.660
ADW17592.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: dps:DP1604 integrase/recombinase; PFAM: integrase family protein; SPTR: Related to integrase/recombinase; PFAM: Phage integrase family.
  
     0.655
ADW16285.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: lpp:lpp2123 hypothetical protein; PFAM: integrase family protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Phage integrase family.
  
     0.597
ADW17191.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: hha:Hhal_0322 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase; PFAM: Phage integrase family.
  
     0.535
ADW18230.1
Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: dol:Dole_0518 dolichyl-phosphate-mannose-protein mannosyltransferase protein; PFAM: glycosyl transferase family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.528
ADW18223.1
Hypothetical protein; InterPro IPR001120: IPR012902; KEGG: sfu:Sfum_2553 type II secretory pathway component PulJ-like; SPTR: Type II secretory pathway component PulJ-like; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.512
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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