STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16457.1Hypothetical protein; KEGG: pfh:PFHG_00469 conserved hypothetical protein; SPTR: DNA-repair helicase, putative. (268 aa)    
Predicted Functional Partners:
ADW16456.1
Phage transcriptional regulator, AlpA; COGs: COG3311 transcriptional regulator protein; InterPro IPR010260; KEGG: bpt:Bpet1289 putative transcriptional regulator (phage-related); PFAM: Prophage CP4-57 regulatory; SPTR: Phage Transcriptional Regulator, AlpA; PFAM: Prophage CP4-57 regulatory protein (AlpA).
       0.468
ADW16458.1
Integrase family protein; InterPro IPR002104; KEGG: tbd:Tbd_0943 putative integrase prophage protein; PFAM: integrase family protein; SPTR: Phage integrase family protein; PFAM: Phage integrase family.
       0.428
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.