STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16460.1AMMECR1 domain protein; COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: dol:Dole_2429 hypothetical protein; PFAM: AMMECR1 domain protein; SPTR: AMMECR1; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family. (193 aa)    
Predicted Functional Partners:
ADW18426.1
Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: dak:DaAHT2_0574 protein of unknown function DUF52; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein.
    0.993
ADW16461.1
KEGG: dak:DaAHT2_1994 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.805
ADW17353.1
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR016431: IPR006638: IPR007197; KEGG: dak:DaAHT2_1232 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
 
     0.805
ADW16462.1
COGs: COG0502 Biotin synthase; InterPro IPR006638: IPR002684: IPR007197: IPR010722; KEGG: cpu:cpfrc_00908 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase 2; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase.
       0.693
ADW16463.1
COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814: IPR005815; KEGG: see:SNSL254_A0857 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase.
       0.693
ADW16464.1
Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: dat:HRM2_32910 putative sodium:dicarboxylate symporter permease; PFAM: protein of unknown function UPF0118; SPTR: Putative sodium:dicarboxylate symporter permease; PFAM: Domain of unknown function DUF20.
       0.571
ADW17264.1
Carbohydrate kinase, YjeF related protein; COGs: COG0063 sugar kinase; InterPro IPR000631: IPR004443: IPR017953; KEGG: dak:DaAHT2_0242 carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related.
   
  
 0.524
ADW16459.1
InterPro IPR013990; KEGG: tgr:Tgr7_0609 hypothetical protein; SMART: Water Stress and Hypersensitive response domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Late embryogenesis abundant protein.
       0.448
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.