STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16508.1Soluble ligand binding domain protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: sus:Acid_1647 polysaccharide export protein; PFAM: Soluble ligand binding domain; polysaccharide export protein; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain. (256 aa)    
Predicted Functional Partners:
ADW18779.1
Lipopolysaccharide biosynthesis protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: dak:DaAHT2_1739 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.991
ADW16510.1
Sugar transferase, PEP-CTERM system associated; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR017464: IPR003362: IPR010916; KEGG: dat:HRM2_19690 CpsE; PFAM: sugar transferase; SPTR: CpsE; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.978
ADW18777.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: dak:DaAHT2_1741 capsular exopolysaccharide family; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
 
 0.920
ADW16727.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013026: IPR000412: IPR013526: IPR013525; KEGG: dol:Dole_1284 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Wzm; manually curated; PFAM: ABC-2 type transporter.
  
  
 0.914
ADW16726.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_3669 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
  
  
 0.895
ADW19312.1
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_1337 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase.
  
  
 0.857
ADW16733.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: dps:DP0048 lipopolysaccharide biosynthesis protein (WbpM); PFAM: polysaccharide biosynthesis protein CapD; SPTR: Related to lipopolysaccharide biosynthesis protein (WbpM); PFAM: Polysaccharide biosynthesis protein.
  
  
 0.845
ADW17217.1
ATPase-like, ParA/MinD; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591: IPR000808; KEGG: dps:DP2935 hypothetical protein; PFAM: ATPase-like, ParA/MinD; SPTR: Conserved hypothetical membrane protein; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase.
  
 
 0.825
ADW16507.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: dak:DaAHT2_1784 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; TIGRFAM: putative PEP-CTERM system TPR-repeat lipoprotein.
 
  
 0.806
ADW16509.1
KEGG: dak:DaAHT2_1738 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.748
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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