STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16579.1KEGG: dps:DP0712 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Putative exonuclease, RdgC. (201 aa)    
Predicted Functional Partners:
ADW16577.1
KEGG: dps:DP0713 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.993
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
   0.904
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
   
   0.840
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.833
ADW16770.1
KEGG: dps:DP0127 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
ADW18715.1
KEGG: dak:DaAHT2_2197 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.701
ADW18340.1
KEGG: dak:DaAHT2_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.677
ADW17978.1
InterPro IPR018710; KEGG: dps:DP2597 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2232).
  
     0.654
ADW16461.1
KEGG: dak:DaAHT2_1994 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.643
ADW16578.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR002151: IPR001440; KEGG: cpc:Cpar_1554 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Kinesin light chain isoform 1; PFAM: Tetratricopeptide repeat.
       0.634
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.