STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16614.1COGs: COG4294 UV damage repair endonuclease; InterPro IPR004601; KEGG: dat:HRM2_48600 putative UV damage endonuclease; PFAM: UV-endonuclease UvdE; SPTR: UvdE; TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE. (322 aa)    
Predicted Functional Partners:
ADW17813.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: vsp:VS_1761 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Carboxylesterase (Est-1); PFAM: alpha/beta hydrolase fold.
  
     0.554
ADW16615.1
COGs: COG0280 Phosphotransacetylase; InterPro IPR016475: IPR004614: IPR010766: IPR002505; KEGG: sdl:Sdel_1045 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein; PRIAM: Phosphate acetyltransferase; SPTR: Phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase.
       0.475
ADW16616.1
Protein of unknown function DUF6 transmembrane; InterPro IPR000620; KEGG: dat:HRM2_40190 permease of the drug/metabolite transporter (DMT) superfamily; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Permease of the drug/metabolite transporter (DMT) superfamily; PFAM: EamA-like transporter family.
       0.475
ADW18776.1
COGs: COG0288 Carbonic anhydrase; InterPro IPR015892: IPR001765; KEGG: dps:DP0850 carbonic anhydrase; PFAM: carbonic anhydrase; SPTR: Carbonic anhydrase; PFAM: Carbonic anhydrase.
  
     0.409
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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