STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16646.1KEGG: dol:Dole_3244 hypothetical protein; SPTR: Putative uncharacterized protein. (80 aa)    
Predicted Functional Partners:
ADW16645.1
KEGG: dol:Dole_3245 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: YeeE/YedE family (DUF395).
       0.714
ADW16643.1
KEGG: dol:Dole_3247 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3343).
       0.700
ADW16644.1
SirA-like domain-containing protein; InterPro IPR001455; KEGG: tye:THEYE_A1506 hypothetical protein; PFAM: SirA-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: SirA-like protein.
       0.700
ADW16642.1
Protein of unknown function UPF0031; COGs: COG0063 sugar kinase; InterPro IPR000631: IPR017953; KEGG: dol:Dole_3248 hypothetical protein; PFAM: protein of unknown function UPF0031; SPTR: Putative uncharacterized protein; PFAM: Carbohydrate kinase.
       0.695
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.