Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADW16682.1Elongator protein 3/MiaB/NifB; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638; KEGG: gme:Gmet_0245 radical SAM family protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein. (520 aa)    
Predicted Functional Partners:
ADW18340.1
KEGG: dak:DaAHT2_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.537
ADW16683.1
COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR000795: IPR004548: IPR005225: IPR004161; KEGG: pca:Pcar_0583 peptide chain release factor 3; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: Peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3.
  
    0.531
ADW16680.1
YcfA family protein; InterPro IPR012933; KEGG: mem:Memar_1246 YcfA family protein; PFAM: YcfA family protein; SPTR: YcfA family protein; PFAM: YcfA-like protein.
       0.515
ADW16681.1
Uncharacterized protein family UPF0150; InterPro IPR005357; KEGG: mem:Memar_1245 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0150).
       0.515
ADW17139.1
KEGG: dak:DaAHT2_0340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.469
ADW16678.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: sat:SYN_00801 esterase-like protein; PFAM: alpha/beta hydrolase fold; SPTR: Esterase-like protein; PFAM: alpha/beta hydrolase fold.
 
     0.427
ADW18715.1
KEGG: dak:DaAHT2_2197 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.417
ADW18810.1
Major facilitator superfamily MFS_1; InterPro IPR005829: IPR011701; KEGG: dps:DP0091 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
  
     0.405
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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