STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16724.1COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: pat:Patl_1185 acyltransferase 3; PFAM: acyltransferase 3; SPTR: Acyltransferase 3; PFAM: Acyltransferase family. (348 aa)    
Predicted Functional Partners:
ADW16726.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_3669 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
  
  
 0.526
ADW16685.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR003660: IPR004358: IPR003661: IPR 003594; KEGG: noc:Noc_0675 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Periplasmic sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoac [...]
  
    0.519
ADW16510.1
Sugar transferase, PEP-CTERM system associated; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR017464: IPR003362: IPR010916; KEGG: dat:HRM2_19690 CpsE; PFAM: sugar transferase; SPTR: CpsE; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
     
 0.466
ADW17839.1
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: hit:NTHI0141 transposon Tn3 transposase; PFAM: transposase Tn3 family protein; SPTR: Transposase; PFAM: Transposase.
  
     0.437
ADW16727.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013026: IPR000412: IPR013526: IPR013525; KEGG: dol:Dole_1284 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Wzm; manually curated; PFAM: ABC-2 type transporter.
  
    0.424
ADW16733.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: dps:DP0048 lipopolysaccharide biosynthesis protein (WbpM); PFAM: polysaccharide biosynthesis protein CapD; SPTR: Related to lipopolysaccharide biosynthesis protein (WbpM); PFAM: Polysaccharide biosynthesis protein.
 
   
 0.424
ADW16721.1
COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR006375: IPR005835: IPR001538; KEGG: bam:Bamb_0755 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
 
  
 0.411
ADW16725.1
Transposase, IS4 family; InterPro IPR002559; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4; PFAM: Transposase DDE domain.
       0.409
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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