STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16740.1COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: dal:Dalk_3414 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein. (455 aa)    
Predicted Functional Partners:
ADW17804.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterProIPR003593: IPR003439: IPR003838: IPR017911: IPR 017871: IPR018087; KEGG: hse:Hsero_2045 antimicrobial peptide ABC transporter ATPase; PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; SPTR: Macrolide export ATP-binding/permease protein MacB; PFAM: ABC transporter; Predicted permease.
  
 
 0.884
ADW16739.1
Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: pca:Pcar_2293 thioesterase; PFAM: thioesterase superfamily protein; SPTR: Predicted thioesterase; PFAM: Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
       0.773
ADW18403.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: tin:Tint_1813 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: Putative Secretion protein HlyD; PFAM: HlyD family secretion protein.
 
 
 0.684
ADW18139.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: nhl:Nhal_3354 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.642
ADW17018.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: ote:Oter_1455 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.603
ADW17491.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: abo:ABO_1849 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: HlyD family secretion protein, putative; PFAM: HlyD family secretion protein.
  
 
 0.585
ADW18103.1
KEGG: tai:Taci_0165 multidrug resistance efflux pump-like protein; SPTR: Multidrug resistance efflux pump-like protein.
  
 
 0.585
ADW17805.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143: IPR000089; KEGG: hse:Hsero_2046 HlyD family secretion, possible efflux component; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Macrolide efflux protein MacA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.567
ADW17396.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: app:CAP2UW1_1525 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.549
ADW17489.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sfu:Sfum_0450 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.547
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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