STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16755.1KEGG: pno:SNOG_13203 hypothetical protein; SPTR: Putative uncharacterized protein. (266 aa)    
Predicted Functional Partners:
ADW16756.1
Putative PAS/PAC sensor protein; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR000014: IPR013767: IPR006674; KEGG: dat:HRM2_20440 two component protein (transcriptional response regulator/sensory box); PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; SPTR: Two component protein (Transcriptional response regulator/sensory box); TIGRFAM: PAS sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.456
ADW16757.1
Putative PAS/PAC sensor protein; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR000014: IPR013767: IPR006674: IPR003607; KEGG: dat:HRM2_20440 two component protein (transcriptional response regulator/sensory box); PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein; SPTR: Two component protein (Transcriptional response regulator/sensory box); TIGRFAM: PAS sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.442
ADW16758.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR013217; KEGG: dat:HRM2_20450 two component protein (cAMP receptor domain/SAM dependent regulatory domain); PFAM: cyclic nucleotide-binding; Methyltransferase type 12; SMART: cyclic nucleotide-binding; SPTR: Two component protein (CAMP receptor domain/SAM dependent regulatory domain); PFAM: Putative lysophospholipase; Cyclic nucleotide-binding domain.
       0.442
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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