STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16801.1Cytochrome c, class III, conserved region; InterPro IPR020942: IPR002322: IPR011031; KEGG: gur:Gura_3652 hypothetical protein; PFAM: Cytochrome c, class III, conserved region; SPTR: Putative uncharacterized protein; PFAM: Class III cytochrome C family. (176 aa)    
Predicted Functional Partners:
ADW16803.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: geo:Geob_1592 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD.
 
     0.920
ADW16802.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017900: IPR017909: IPR017896; KEGG: geo:Geob_1593 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
     0.901
ADW16799.1
KEGG: mva:Mvan_5775 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.850
ADW16800.1
Membrane protease FtsH catalytic subunit; COGs: COG0465 ATP-dependent Zn protease; InterProIPR003959: IPR000642: IPR005936: IPR003960: IPR 003593; KEGG: gsu:GSU1809 cell division protein FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; PRIAM: Adenosinetriphosphatase; SMART: AAA ATPase; SPTR: Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH.
       0.791
ADW16796.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767: IPR013656: IPR003661: IPR003594: IPR 004358: IPR000014: IPR018313: IPR005467; KEGG: pca:Pcar_2366 two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; P [...]
 
     0.690
ADW18348.1
Hypothetical protein; InterPro IPR011031; KEGG: glo:Glov_3348 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
ADW19455.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: sus:Acid_4205 polysulphide reductase, NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase, NrfD; PFAM: Polysulphide reductase, NrfD.
 
     0.621
ADW18340.1
KEGG: dak:DaAHT2_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.571
ADW16797.1
PAS sensor protein; InterPro IPR013767: IPR000014; KEGG: met:M446_4819 putative PAS/PAC sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
     0.514
ADW16798.1
PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR001789: IPR013656: IPR002078: IPR002197: IPR 020441: IPR000014: IPR003593; KEGG: gsu:GSU2506 sensory box protein/sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: response regulator receiver; PAS domain containing protein; AAA ATPase; SPTR: Sensory box protein/si [...]
 
     0.496
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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