STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16803.1COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: geo:Geob_1592 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD. (417 aa)    
Predicted Functional Partners:
ADW16802.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017900: IPR017909: IPR017896; KEGG: geo:Geob_1593 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 0.978
ADW16801.1
Cytochrome c, class III, conserved region; InterPro IPR020942: IPR002322: IPR011031; KEGG: gur:Gura_3652 hypothetical protein; PFAM: Cytochrome c, class III, conserved region; SPTR: Putative uncharacterized protein; PFAM: Class III cytochrome C family.
 
     0.920
ADW18049.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900: IPR017896: IPR014603; KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 0.864
ADW19452.1
Hydrogenase 2 protein HybA; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017909: IPR017896: IPR017900; KEGG: mag:amb1649 hydrogenase 2 protein HybA; SPTR: Fe-S-cluster-containing hydrogenase components 1; PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 0.838
ADW16799.1
KEGG: mva:Mvan_5775 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.759
ADW18007.1
Trimethylamine-N-oxide reductase (cytochrome c); COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655: IPR006963: IPR006656: IPR006657; KEGG: dvm:DvMF_0320 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Formate dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
  
 
 0.739
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   0.707
ADW16963.1
COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795: IPR004161: IPR004160: IPR004541: IPR 005225; KEGG: dps:DP1109 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu 1; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU.
  
   0.707
ADW16796.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767: IPR013656: IPR003661: IPR003594: IPR 004358: IPR000014: IPR018313: IPR005467; KEGG: pca:Pcar_2366 two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; P [...]
 
     0.676
ADW18540.1
Nitrate reductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR017909: IPR006963: IPR006656: IPR006657: IPR 006311; KEGG: tye:THEYE_A1157 thiosulfate reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; PRIAM: Nitrate reductase; SPTR: Twin-arginine translocation pathway signal; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.672
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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