STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16809.1Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: adg:Adeg_2056 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily. (351 aa)    
Predicted Functional Partners:
ADW16810.1
COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: pca:Pcar_1589 beta-lactamase superfamily hydrolase; SPTR: Metal-dependent hydrolase of the beta-lactamase superfamily II; PFAM: Metallo-beta-lactamase superfamily.
       0.746
ADW16811.1
InterPro IPR006683; KEGG: ppd:Ppro_1953 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily.
       0.746
ADW16812.1
Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: sat:SYN_01175 putative cytoplasmic protein; PFAM: Uncharacterised protein family UPF0066; SPTR: Hypothetical cytosolic protein; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: probable methyltransferase, YaeB/AF_0241 family.
       0.746
ADW17026.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197: IPR017200: IPR006638; KEGG: dak:DaAHT2_1941 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.580
ADW16808.1
KEGG: dat:HRM2_31840 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.572
ADW17089.1
Radical SAM domain protein; InterPro IPR007197; KEGG: bhy:BHWA1_01685 radical SAM superfamily; PFAM: Radical SAM domain protein; SPTR: Radical SAM superfamily; PFAM: Radical SAM superfamily.
  
     0.548
nifU
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.465
ADW17904.1
Uncharacterized protein family UPF0324; InterPro IPR018383; KEGG: tye:THEYE_A0244 hypothetical membrane protein; PFAM: Uncharacterised protein family UPF0324; SPTR: Hypothetical membrane protein; PFAM: Conserved hypothetical protein 698.
  
    0.424
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.