STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16813.1KEGG: rpe:RPE_3049 hypothetical protein; SPTR: Putative uncharacterized protein. (519 aa)    
Predicted Functional Partners:
ADW16814.1
NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: dma:DMR_39490 flavodoxin-like fold family protein; PFAM: NADPH-dependent FMN reductase; SPTR: Flavodoxin-like fold family protein; PFAM: NADPH-dependent FMN reductase.
       0.561
ADW17802.1
KEGG: afw:Anae109_2404 acyltransferase family protein; SPTR: Acyltransferase family protein; PFAM: Protein of unknown function (DUF1624).
  
     0.542
ADW18881.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: sat:SYN_00021 alcohol dehydrogenase, class IV; PFAM: iron-containing alcohol dehydrogenase; SPTR: Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase.
  
     0.538
ADW17272.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_6620 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
 
  
 0.521
nifJ
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895: IPR017896: IPR017900: IPR002880: IPR 019752: IPR019456: IPR011766; KEGG: dak:DaAHT2_0906 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavod [...]
   
   0.511
ADW16609.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterProIPR000253: IPR003439: IPR013525: IPR017871: IPR 003593; KEGG: cag:Cagg_0751 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: ABC transporter related; Forkhead-associated protein; ABC-2 type transporter; SMART: Forkhead-associated protein; AAA ATPase; SPTR: FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: ABC transporter; FHA domain; ABC-2 type transporter.
  
  
 0.486
ADW16602.1
Sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000253: IPR002078: IPR020441: IPR003018: IPR 002197: IPR003593; KEGG: psl:Psta_3595 transcriptional regulator, NifA subfamily, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; Forkhead-associated protein; GAF domain protein; helix-turn-helix Fis-type; SMART: Forkhead-associated protein; GAF domain protein; AAA ATPase; SPTR: Transcriptional regulator, NifA subfamily, Fis Family; PFAM: GAF domain; Bacter [...]
  
    0.485
ADW16631.1
COGs: COG4276 conserved hypothetical protein; KEGG: caa:Caka_1531 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.469
fliI
Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR003593: IPR000194: IPR020003: IPR005714; KEGG: dps:DP2659 flagellum-specific ATP synthase (FliI); PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; SPTR: ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family.
  
 
 0.431
ADW18305.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: geo:Geob_0641 TPR repeat-containing protein; PFAM: glycosyl transferase group 1; SPTR: TPR repeat-containing protein; PFAM: Glycosyl transferases group 1.
  
 
 0.412
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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