STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16829.1COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR007409: IPR006935: IPR013670: IPR014001: IPR 014021: IPR001650; KEGG: pnu:Pnuc_1134 EcoEI R domain-containing protein; PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: EcoEI R, C-terminal domain protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res s [...] (786 aa)    
Predicted Functional Partners:
ADW16828.1
Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR002296: IPR002052; KEGG: ana:alr3620 type I restriction modification enzyme M subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Putative restriction modification enzyme M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
 
 
 0.979
ADW16827.1
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ect:ECIAI39_4817 type I restriction enzyme EcoAI specificity protein (S protein) (S.EcoAI); PFAM: restriction modification system DNA specificity domain; SPTR: Type I restriction-modification system, S subunit, putative; PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.961
ADW18589.1
Protein of unknown function DUF450; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296: IPR007409: IPR003356; KEGG: gur:Gura_3600 N-6 DNA methylase; PFAM: protein of unknown function DUF450; N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); N-6 DNA Methylase.
 
 
 0.923
ADW16440.1
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR002296: IPR003356; KEGG: dze:Dd1591_4253 N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
 
 0.836
ADW16442.1
Hypothetical protein; KEGG: mev:Metev_0464 restriction modification system DNA specificity domain-containing protein; SPTR: Restriction modification system DNA specificity domain protein.
 
 
 0.721
ADW18590.1
Hypothetical protein; KEGG: cth:Cthe_1144 restriction modification system DNA specificity subunit; SPTR: Putative uncharacterized protein.
  
 
 0.705
ADW16443.1
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: hha:Hhal_1153 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Restriction modification system DNA specificity domain; PFAM: Type I restriction modification DNA specificity domain.
  
 
 0.701
ADW19265.1
COGs: COG1715 Restriction endonuclease; InterPro IPR007560: IPR000572; KEGG: sfu:Sfum_2534 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease.
  
  
 0.586
ADW18425.1
Transposase, IS4 family; InterPro IPR002559; KEGG: dak:DaAHT2_2599 transposase IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
    0.408
ADW16846.1
Thiamine biosynthesis protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR020536; KEGG: dps:DP2965 hypothetical protein; PFAM: Thiamine biosynthesis protein-like; SPTR: Thiamine biosynthesis protein; PFAM: Thiamine biosynthesis protein (ThiI).
  
    0.401
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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