STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16835.1Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: dal:Dalk_5153 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J. (224 aa)    
Predicted Functional Partners:
ADW16836.1
COGs: COG3156 Type II secretory pathway component PulK; KEGG: dal:Dalk_5152 type II secretory pathway component PulK-like protein; SPTR: Type II secretory pathway component PulK-like protein; PFAM: General secretion pathway protein K.
  
 
 0.968
ADW18223.1
Hypothetical protein; InterPro IPR001120: IPR012902; KEGG: sfu:Sfum_2553 type II secretory pathway component PulJ-like; SPTR: Type II secretory pathway component PulJ-like; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
 
 0.881
ADW16833.1
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: sat:SYN_01552 hypothetical protein; SPTR: Hypothetical membrane protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H.
  
  
 0.816
ADW16834.1
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: dal:Dalk_5154 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.803
ADW16843.1
General secretion pathway protein F; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR003004: IPR011850: IPR001992; KEGG: dol:Dole_1045 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F.
  
  
 0.794
ADW18341.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: dps:DP2782 type 4 fimbrial assembly protein (PilC); PFAM: Type II secretion system F domain; SPTR: Probable type 4 fimbrial assembly protein (PilC); PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.794
ADW16832.1
General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterProIPR012902: IPR013545: IPR000983: IPR010054: IPR 001120; KEGG: dat:HRM2_11400 GspG1; PFAM: type II secretion system protein G; SPTR: GspG1; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
       0.727
ADW16838.1
KEGG: dat:HRM2_11340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: General secretion pathway, M protein.
  
  
 0.692
ADW16842.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482: IPR013369: IPR003593; KEGG: dal:Dalk_5144 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: General secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E.
  
 
 0.690
ADW16840.1
Hypothetical protein; KEGG: dal:Dalk_5148 PDZ/DHR/GLGF domain-containing protein; SPTR: PDZ/DHR/GLGF domain-containing protein.
  
  
 0.686
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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