STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16840.1Hypothetical protein; KEGG: dal:Dalk_5148 PDZ/DHR/GLGF domain-containing protein; SPTR: PDZ/DHR/GLGF domain-containing protein. (269 aa)    
Predicted Functional Partners:
ADW16841.1
General secretion pathway protein D; COGs: COG1450 Type II secretory pathway component PulD; InterProIPR005644: IPR004846: IPR001440: IPR001775: IPR 013356: IPR019734: IPR013026; KEGG: dol:Dole_1041 general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: General secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIG [...]
  
 
 0.972
ADW19345.1
Secretin/TonB short domain protein; InterPro IPR011662: IPR013026; KEGG: dps:DP0112 fimbrial assembly protein PilQ [precursor]; PFAM: Secretin/TonB short domain; SPTR: Related to fimbrial assembly protein PilQ [Precursor]; PFAM: Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes.
  
 
 0.936
ADW19344.1
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR004846: IPR001775; KEGG: dps:DP0113 type II protein secretion protein; PFAM: type II and III secretion system protein; SPTR: Related to type II protein secretion protein; manually curated; PFAM: Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL.
  
 
 0.935
ADW16838.1
KEGG: dat:HRM2_11340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: General secretion pathway, M protein.
     
 0.835
ADW16839.1
KEGG: dal:Dalk_5149 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.803
ADW16837.1
Fimbrial assembly family protein; InterPro IPR007813; KEGG: sat:SYN_01555 general secretory pathway protein L; PFAM: Fimbrial assembly family protein; SPTR: General secretory pathway protein L; PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L.
     
 0.796
ADW16836.1
COGs: COG3156 Type II secretory pathway component PulK; KEGG: dal:Dalk_5152 type II secretory pathway component PulK-like protein; SPTR: Type II secretory pathway component PulK-like protein; PFAM: General secretion pathway protein K.
  
  
 0.739
ADW16834.1
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: dal:Dalk_5154 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.701
ADW16832.1
General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterProIPR012902: IPR013545: IPR000983: IPR010054: IPR 001120; KEGG: dat:HRM2_11400 GspG1; PFAM: type II secretion system protein G; SPTR: GspG1; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.694
ADW16835.1
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: dal:Dalk_5153 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J.
  
  
 0.686
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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