STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16902.1Cobalamin B12-binding domain protein; InterPro IPR006158: IPR007197; KEGG: tjr:TherJR_0239 radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: B12 binding domain. (659 aa)    
Predicted Functional Partners:
ADW16899.1
Hypothetical protein; KEGG: dak:DaAHT2_0707 exodeoxyribonuclease V, gamma subunit; SPTR: Exodeoxyribonuclease V, RecC subunit.
       0.773
ADW16900.1
KEGG: dat:HRM2_21840 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2868).
       0.773
ADW16901.1
InterPro IPR002917; KEGG: dat:HRM2_21850 FusA1; PFAM: GTP-binding protein HSR1-related; SPTR: FusA1; PFAM: GTPase of unknown function; Domain of unknown function (DUF3482).
       0.773
ADW16898.1
Adenylate/guanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789: IPR001054: IPR018297; KEGG: bja:blr2288 two-component hybrid sensor and regulator; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; SPTR: Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Response regulator receiver domain.
       0.668
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.649
ADW18088.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660: IPR016898; KEGG: dps:DP2743 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family.
   
    0.591
ADW19307.1
Polyphosphate:AMP phosphotransferase; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: slt:Slit_2953 protein of unknown function DUF344; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase.
   
    0.591
ADW16903.1
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811: IPR011833; KEGG: dak:DaAHT2_1315 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; SPTR: Glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases.
       0.500
ADW18054.1
COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042: IPR003953; KEGG: dak:DaAHT2_1340 HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: HI0933 family protein; PFAM: Thi4 family.
 
  
 0.483
ADW19062.1
Septum formation initiator; InterPro IPR007060; KEGG: dak:DaAHT2_0632 septum formation initiator; PFAM: Septum formation initiator; SPTR: Septum formation initiator; PFAM: Septum formation initiator.
  
     0.453
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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