Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADW16915.1Import inner membrane translocase subunit Tim44; COGs: COG4395 conserved hypothetical protein; InterPro IPR007379; KEGG: dps:DP3112 hypothetical protein; PFAM: import inner membrane translocase subunit Tim44; SPTR: Hypothetical membrane protein; PFAM: Protein of unknown function (DUF1517); Tim44-like domain. (313 aa)    
Predicted Functional Partners:
ADW16924.1
InterPro IPR002059: IPR011129; KEGG: dps:DP1086 cold-shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Similar to cold-shock protein; PFAM: 'Cold-shock' DNA-binding domain; Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
     0.597
ADW18519.1
KEGG: bfo:BRAFLDRAFT_90440 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.502
ADW17978.1
InterPro IPR018710; KEGG: dps:DP2597 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2232).
  
     0.478
ADW18971.1
Protein of unknown function UPF0005; COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: dps:DP1672 hypothetical protein; PFAM: protein of unknown function UPF0005; SPTR: Conserved hypothetical membrane protein, probably cold-shock inducible; PFAM: Uncharacterised protein family UPF0005.
   
  
 0.437
htpX
Heat shock protein; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ppd:Ppro_3243 peptidase M48, Ste24p; PFAM: peptidase M48 Ste24p; SPTR: HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.
   
  
 0.408
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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