STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW16929.1COGs: COG1792 Cell shape-determining protein; InterPro IPR007221: IPR005223; KEGG: dak:DaAHT2_1934 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC, subtype; TIGRFAM: rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC. (294 aa)    
Predicted Functional Partners:
ADW16930.1
Rod shape-determining protein MreB; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753: IPR004000; KEGG: dps:DP1080 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SMART: actin/actin family protein; SPTR: Probable rod shape-determining protein (MreB); TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.
 
 
 0.997
ADW16927.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR017790; KEGG: dps:DP1083 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Probable penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
 
 
 0.978
ADW16928.1
KEGG: dak:DaAHT2_1935 rod shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
 
 0.975
ADW16926.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR011923; KEGG: dak:DaAHT2_1937 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA.
 
  
 0.920
ADW18975.1
Septum site-determining protein MinC; COGs: COG0850 Septum formation inhibitor; InterPro IPR005526: IPR013033; KEGG: sat:SYN_02704 cell division inhibitor; PFAM: Septum formation inhibitor MinC; SPTR: Cell division inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC.
  
  
 0.898
ADW16865.1
COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR005543; KEGG: dak:DaAHT2_1486 penicillin-binding protein dimerization domain protein; PFAM: Penicillin-binding protein dimerisation domain; penicillin-binding protein transpeptidase; SPTR: Penicillin-binding protein dimerization domain protein; PFAM: Penicillin-binding Protein dimerisation domain.
 
 
 0.862
ADW18974.1
Septum site-determining protein MinD; COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR010223; KEGG: pag:PLES_18231 cell division inhibitor MinD; SPTR: Cell division inhibitor MinD; TIGRFAM: septum site-determining protein MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD.
  
    0.849
ADW16326.1
COGs: COG2003 DNA repair protein; InterPro IPR020891: IPR001405; KEGG: dda:Dd703_2347 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc.
  
  
 0.823
ADW16575.1
COGs: COG2003 DNA repair protein; InterPro IPR001405: IPR020891; KEGG: dak:DaAHT2_1957 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.
  
  
 0.823
ADW19205.1
COGs: COG2003 DNA repair protein; InterPro IPR001405: IPR020891; KEGG: mpt:Mpe_A1658 hypothetical protein; PFAM: DNA repair protein RadC; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc.
  
  
 0.823
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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