Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADW17023.1PAS fold-4 domain protein; InterPro IPR013656: IPR010916; KEGG: pgn:PGN_0746 hypothetical protein; PFAM: PAS fold-4 domain protein; SPTR: PAS fold; PFAM: PAS fold. (115 aa)    
Predicted Functional Partners:
ADW17024.1
Metal dependent phophohydrolase; InterPro IPR006674: IPR006675; KEGG: dps:DP1279 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Putative uncharacterized protein; TIGRFAM: metal dependent phophohydrolase; manually curated; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
       0.671
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.666
ADW17026.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197: IPR017200: IPR006638; KEGG: dak:DaAHT2_1941 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.510
ADW17022.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: dma:DMR_43090 putative outer membrane protein; PFAM: OmpA/MotB domain protein; SPTR: Putative outer membrane protein; PFAM: OmpA family.
       0.494
ADW17021.1
RNA-metabolising metallo-beta-lactamase; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: tin:Tint_0439 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Metallo-beta-lactamase family protein, RNA-specific; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.
       0.434
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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