STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17089.1Radical SAM domain protein; InterPro IPR007197; KEGG: bhy:BHWA1_01685 radical SAM superfamily; PFAM: Radical SAM domain protein; SPTR: Radical SAM superfamily; PFAM: Radical SAM superfamily. (287 aa)    
Predicted Functional Partners:
ADW17088.1
Hypothetical protein; InterPro IPR007921; KEGG: dvm:DvMF_2393 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.741
ADW17087.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330: IPR001650: IPR014001: IPR014021; KEGG: sat:SYN_02071 swf/snf family helicase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Swf/snf family helicase; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.670
ADW17447.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: adg:Adeg_2056 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.613
ADW18889.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: pjd:Pjdr2_2724 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.578
ADW16809.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: adg:Adeg_2056 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.548
ADW18976.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197: IPR000385; KEGG: dsa:Desal_3155 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.544
ADW17090.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593: IPR015854; KEGG: dps:DP1627 lipoprotein releasing system ATP-binding protein (LolD); PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Lipoprotein-releasing system ATP-binding protein LolD; PFAM: ABC transporter.
       0.496
ADW17091.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838: IPR011925; KEGG: dps:DP1628 lipoprotein releasing system transmembrane protein (LolC); PFAM: protein of unknown function DUF214; SPTR: Related to lipoprotein releasing system transmembrane protein (LolC); TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family.
       0.496
ADW17092.1
COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365: IPR004364: IPR002313: IPR018149: IPR 006195; KEGG: dps:DP1629 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial.
       0.475
ADW17408.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197: IPR000385; KEGG: dsa:Desal_3155 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
     0.472
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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