STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17192.1Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR014015: IPR006500; KEGG: hmo:HM1_2896 primase, putative; SPTR: Phage/plasmid primase P4-like; TIGRFAM: phage/plasmid primase, P4 family; PFAM: Poxvirus D5 protein-like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain. (548 aa)    
Predicted Functional Partners:
ADW16407.1
Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR014015: IPR006500: IPR014818; KEGG: dps:DP1571 hypothetical protein; PFAM: primase P4; SPTR: Putative uncharacterized protein; TIGRFAM: phage/plasmid primase, P4 family; PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain.
  
     0.769
ADW16388.1
Phage portal protein, lambda family; COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: aco:Amico_1121 phage portal protein, lambda family; PFAM: portal protein lambda; SPTR: Putative uncharacterized protein; TIGRFAM: phage portal protein, lambda family; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
 
    0.534
ADW16386.1
KEGG: aco:Amico_1120 peptidase U35 phage prohead HK97; SPTR: Peptidase U35 phage prohead HK97.
  
     0.429
ADW17838.1
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR006120: IPR006118; KEGG: nwa:Nwat_2446 resolvase domain-containing protein; PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; SPTR: Resolvase; PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase.
 
  
 0.428
ADW16398.1
P4 alpha zinc-binding domain protein; COGs: COG0358 DNA primase; InterPro IPR013237; KEGG: dps:DP1572 hypothetical protein; PFAM: P4 alpha zinc-binding domain protein; SPTR: Putative uncharacterized protein; PFAM: CHC2 zinc finger.
 
   
 0.410
ADW17191.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: hha:Hhal_0322 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase; PFAM: Phage integrase family.
       0.401
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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