STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17224.1YbbR family protein; InterPro IPR012505; KEGG: dps:DP1640 hypothetical protein; PFAM: YbbR family protein; SPTR: YbbR-like; PFAM: YbbR-like protein. (312 aa)    
Predicted Functional Partners:
ADW17225.1
Protein of unknown function DUF147; COGs: COG1624 conserved hypothetical protein; InterPro IPR014046: IPR003390; KEGG: dps:DP1639 hypothetical protein; PFAM: protein of unknown function DUF147; SPTR: Conserved hypothetical membrane protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159.
 
  
 0.986
ADW18641.1
Protein of unknown function DUF147; COGs: COG1624 conserved hypothetical protein; InterPro IPR003390: IPR012505; KEGG: dal:Dalk_0397 protein of unknown function DUF147; PFAM: protein of unknown function DUF147; YbbR family protein; SPTR: Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159.
 
  
0.855
ADW17223.1
COGs: COG1109 Phosphomannomutase; InterProIPR005841: IPR005844: IPR005845: IPR005846: IPR 005843: IPR016066: IPR006352; KEGG: dps:DP1641 phosphoglucomutase/phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomanno [...]
  
  
 0.681
ADW17226.1
Nitroreductase; InterPro IPR000415; KEGG: hmo:HM1_3019 nitroreductase family protein; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.520
ADW17227.1
KEGG: dat:HRM2_06110 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative transmembrane protein (PGPGW).
       0.520
ADW17056.1
COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258: IPR018392: IPR000189: IPR002482; KEGG: dak:DaAHT2_1690 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; LysM domain.
 
    0.427
ADW18506.1
KEGG: tde:TDE1967 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.425
ADW18792.1
H+transporting two-sector ATPase B/B' subunit; COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146; KEGG: dps:DP0830 ATP synthase, subunit b (AtpF); PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: ATP synthase subunit b; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b.
  
     0.418
ADW16929.1
COGs: COG1792 Cell shape-determining protein; InterPro IPR007221: IPR005223; KEGG: dak:DaAHT2_1934 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC, subtype; TIGRFAM: rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC.
 
    0.408
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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