STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17269.1Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197: IPR000385; KEGG: dak:DaAHT2_0074 DNA repair photolyase-like protein; PFAM: Radical SAM domain protein; SPTR: DNA repair photolyase-like protein. (370 aa)    
Predicted Functional Partners:
ADW17268.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dak:DaAHT2_0466 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
     0.924
ADW17267.1
COGs: COG1530 Ribonuclease G and E; InterPro IPR019307: IPR018247: IPR004659; KEGG: dps:DP2581 cytoplasmic axial filament protein (ribonuclease G); PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Related to cytoplasmic axial filament protein (Ribonuclease G); TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
       0.549
ADW17771.1
Protein of unknown function DUF181; COGs: COG1944 conserved hypothetical protein; InterPro IPR003776: IPR019734: IPR001440: IPR013026; KEGG: dps:DP1955 hypothetical protein; PFAM: protein of unknown function DUF181; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: YcaO-like family; Tetratricopeptide repeat; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
     0.488
ADW16705.1
YHS domain-containing protein; InterPro IPR007029: IPR011017; KEGG: dps:DP0429 hypothetical protein; PFAM: YHS domain-containing protein; SMART: TRASH domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YHS domain.
 
     0.482
ADW16282.1
Phosphoesterase RecJ domain protein; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667; KEGG: dak:DaAHT2_1369 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; SPTR: Phosphoesterase RecJ domain protein; PFAM: DHHA1 domain; DHH family.
  
     0.480
ADW17266.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: dak:DaAHT2_1339 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.
       0.446
ADW17265.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: dak:DaAHT2_1373 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ; PFAM: Predicted permease YjgP/YjgQ family.
       0.443
ADW18849.1
Peptidase M48 Ste24p; InterPro IPR019734: IPR013026: IPR001915; KEGG: dps:DP0525 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M48.
  
     0.429
ADW19096.1
Purine or other phosphorylase family 1; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: dak:DaAHT2_2542 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine and other phosphorylases, family 1; PFAM: Phosphorylase superfamily.
  
     0.414
ADW17303.1
Nucleoside recognition domain protein; COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis; InterPro IPR011415: IPR011642; KEGG: aeh:Mlg_1273 nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein; SPTR: Nucleoside recognition domain protein; PFAM: Nucleoside recognition.
     
 0.410
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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