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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17270.1KEGG: sfu:Sfum_3676 hypothetical protein; SPTR: Putative uncharacterized protein. (94 aa)    
Predicted Functional Partners:
ADW17271.1
KEGG: dps:DP0718 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540).
       0.495
ADW17268.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dak:DaAHT2_0466 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.400
ADW17269.1
Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197: IPR000385; KEGG: dak:DaAHT2_0074 DNA repair photolyase-like protein; PFAM: Radical SAM domain protein; SPTR: DNA repair photolyase-like protein.
       0.400
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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