STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17319.1KEGG: dvl:Dvul_0409 hypothetical protein; SPTR: Putative uncharacterized protein. (111 aa)    
Predicted Functional Partners:
ADW17318.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: aav:Aave_0872 two component, sigma54 specific, fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain.
       0.793
ADW17320.1
Sodium/proton antiporter, NhaD family; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: gur:Gura_2788 citrate transporter; PFAM: Citrate transporter; SPTR: Citrate transporter; PFAM: Citrate transporter; TC 2.A.62.
       0.547
nifU
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.532
ADW19185.1
Mo-nitrogenase iron protein subunit NifH; COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR000392: IPR005977; KEGG: dsa:Desal_0447 nitrogenase reductase; PFAM: NifH/frxC-family protein; PRIAM: Nitrogenase; SPTR: Nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein.
  
  
 0.498
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.