Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADW17320.1Sodium/proton antiporter, NhaD family; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: gur:Gura_2788 citrate transporter; PFAM: Citrate transporter; SPTR: Citrate transporter; PFAM: Citrate transporter; TC 2.A.62. (426 aa)    
Predicted Functional Partners:
ADW17318.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: aav:Aave_0872 two component, sigma54 specific, fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain.
       0.547
ADW17319.1
KEGG: dvl:Dvul_0409 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.547
ADW17321.1
Sodium/sulphate symporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dsa:Desal_3508 sodium/sulphate symporter; PFAM: sodium/sulphate symporter; SPTR: Sodium/sulphate symporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.
     
 0.516
ADW17322.1
InterPro IPR000644; KEGG: dak:DaAHT2_2514 CBS domain containing protein; PFAM: CBS domain containing protein; SPTR: CBS domain containing protein; PFAM: CBS domain.
       0.421
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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