STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17334.1Hypothetical protein; InterPro IPR011031; KEGG: ank:AnaeK_3248 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain. (635 aa)    
Predicted Functional Partners:
ADW17333.1
COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: pen:PSEEN2056 peptidyl-tRNA hydrolase domain protein; PFAM: Class I peptide chain release factor; SPTR: Putative uncharacterized protein; PFAM: RF-1 domain.
       0.486
ADW18348.1
Hypothetical protein; InterPro IPR011031; KEGG: glo:Glov_3348 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
ADW19253.1
KEGG: sse:Ssed_1054 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.455
ADW16349.1
Sex pilus assembly protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: sat:SYN_01865 sex pilus assembly protein; SPTR: Sex pilus assembly protein; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC.
 
     0.431
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.