STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17451.1KEGG: cjd:JJD26997_0840 hypothetical protein; SPTR: Putative uncharacterized protein. (238 aa)    
Predicted Functional Partners:
ADW17450.1
Metal-dependent phosphohydrolase HD sub domain protein; InterPro IPR006674; KEGG: sat:SYN_01887 metal dependent phosphohydrolases; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Metal dependent phosphohydrolases; manually curated; PFAM: HD domain.
       0.791
ADW17452.1
KEGG: bcr:BCAH187_C0216 site-specific recombinase; SPTR: Site-specific recombinase.
       0.713
ADW17449.1
TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: TRAG family protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
       0.524
ADW17448.1
KEGG: ppd:Ppro_0194 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.490
ADW17453.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: plt:Plut_1957 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone-like DNA-binding protein; PFAM: Bacterial DNA-binding protein.
       0.490
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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