Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADW17468.1Protein of unknown function UCP012608; COGs: COG4427 conserved hypothetical protein; InterPro IPR011200; KEGG: hmu:Hmuk_0177 hypothetical protein; PFAM: protein of unknown function UCP012608; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2332). (390 aa)    
Predicted Functional Partners:
ADW17469.1
SNARE associated Golgi protein-related protein; COGs: COG1238 membrane protein; InterPro IPR020143: IPR015414; KEGG: sno:Snov_0603 SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein.
       0.497
ADW17474.1
COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: dak:DaAHT2_0978 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1343).
  
     0.411
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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