STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17596.1YD repeat protein; COGs: COG3209 Rhs family protein; InterPro IPR006530: IPR008454: IPR001826; KEGG: hna:Hneap_0941 YD repeat protein; PFAM: YD repeat-containing protein; Cna B domain protein; RHS protein; SPTR: YD repeat protein; TIGRFAM: YD repeat protein; PFAM: Protein of unknown function (DUF2778); RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies). (2259 aa)    
Predicted Functional Partners:
ADW16510.1
Sugar transferase, PEP-CTERM system associated; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR017464: IPR003362: IPR010916; KEGG: dat:HRM2_19690 CpsE; PFAM: sugar transferase; SPTR: CpsE; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
   
    0.727
ADW17595.1
Hypothetical protein; KEGG: pla:Plav_1001 C-type lectin domain-containing protein; SPTR: C-type lectin domain protein.
       0.701
ADW18221.1
Na-Ca exchanger/integrin-beta4; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR018247: IPR000209: IPR003644; KEGG: dal:Dalk_4404 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Type 4 fimbrial biogenesis protein PilY1; PFAM: Protein metal binding site; Calx-beta domain.
 
     0.678
ADW17148.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665; KEGG: lif:LinJ14.1210 kinesin K39; PFAM: OmpA/MotB domain protein; SPTR: Kinesin K39, putative; PFAM: OmpA family.
  
 
 0.616
ADW17594.1
KEGG: vpo:Kpol_376p19 hypothetical protein; SPTR: Putative PKD domain protein.
       0.590
ADW18228.1
InterPro IPR019734: IPR013026: IPR001440; KEGG: dol:Dole_1411 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat.
  
     0.514
ADW18634.1
Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: dak:DaAHT2_1047 protein of unknown function UPF0027; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027.
  
     0.480
ADW16831.1
Hypothetical protein; InterPro IPR013431; KEGG: cph:Cpha266_2335 hemolysin-type calcium-binding region; SPTR: Putative uncharacterized protein; TIGRFAM: delta-60 repeat domain.
 
  
 0.416
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.