STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17599.1KEGG: rso:RS06029 hypothetical protein; SPTR: Putative signal peptide protein; manually curated. (113 aa)    
Predicted Functional Partners:
ADW17598.1
Cna B domain protein; COGs: COG3209 Rhs family protein; InterPro IPR008454: IPR001826; KEGG: rso:RS00908 putative RSH-related protein; PFAM: Cna B domain protein; RHS protein; SPTR: Putative rsh-related protein; manually curated; TIGRFAM: RHS repeat-associated core domain.
       0.773
ADW17597.1
Cna B domain protein; COGs: COG3209 Rhs family protein; InterPro IPR008454: IPR001826; KEGG: ssn:SSON_1675 rhs core protein with extension; PFAM: Cna B domain protein; RHS protein; SPTR: Type VI secretion system Vgr family protein; TIGRFAM: RHS repeat-associated core domain.
       0.431
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.