STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17678.1AsmA family protein; COGs: COG2982 Uncharacterized protein involved in outer membrane biogenesis; InterPro IPR007844; KEGG: mag:amb3104 hypothetical protein; PFAM: AsmA family protein; SPTR: Protein involved in outer membrane biogenesis; PFAM: AsmA family. (902 aa)    
Predicted Functional Partners:
ADW17252.1
COGs: COG2930 conserved hypothetical protein; KEGG: mca:MCA0638 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF500).
  
    0.626
ADW18168.1
VacJ family lipoprotein; COGs: COG2853 Surface lipoprotein; InterPro IPR007428; KEGG: dak:DaAHT2_1297 VacJ family lipoprotein; PFAM: VacJ family lipoprotein; SPTR: VacJ-like lipoprotein; PFAM: VacJ like lipoprotein.
  
   
 0.531
ADW17462.1
COGs: COG2823 periplasmic or secreted lipoprotein; InterPro IPR007055: IPR014004; KEGG: ote:Oter_0063 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region; SPTR: Transport-associated; PFAM: Putative phospholipid-binding domain.
  
  
 0.430
ADW17591.1
Regulatory protein MerR; InterPro IPR000551; KEGG: pca:Pcar_1425 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; manually curated; PFAM: MerR family regulatory protein.
  
    0.406
ADW17679.1
COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: dps:DP1766 molybdopterin-guanine dinucleotide biosynthesis protein B; SPTR: Related to molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.
       0.403
ADW17680.1
Magnesium and cobalt transport protein CorA; COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR004488: IPR002523; KEGG: pin:Ping_1732 magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; SPTR: Magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA).
       0.403
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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