STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17707.1Penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterPro IPR011815: IPR001264: IPR001460: IPR009647; KEGG: pfs:PFLU6112 putative penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; SPTR: Putative penicillin-binding protein; TIGRFAM: penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C. (783 aa)    
Predicted Functional Partners:
ADW17708.1
Alpha-2-macroglobulin domain protein; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890: IPR011625; KEGG: pfs:PFLU6111 hypothetical protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; SPTR: Putative uncharacterized protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain.
   
 0.981
ADW17079.1
Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264: IPR001460: IPR011816: IPR022272; KEGG: dak:DaAHT2_0246 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: Penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.
  
  
0.935
ADW17057.1
Peptidoglycan glycosyltransferase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460: IPR003029; KEGG: dps:DP1675 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Glycosyl transferase, family 51; PFAM: Transglycosylase.
  
  
0.920
ADW17709.1
GCN5-related N-acetyltransferase; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: pca:Pcar_2865 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
       0.457
ADW17339.1
Nicotinamidase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: gur:Gura_1739 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; PRIAM: Nicotinamidase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family.
   
    0.422
ADW16926.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR011923; KEGG: dak:DaAHT2_1937 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA.
  
   
 0.404
ADW16677.1
Von Willebrand factor type A; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: cpi:Cpin_1196 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor; von Willebrand factor type A domain; Domain of unknown function (DUF3520).
  
     0.403
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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