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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17760.1KEGG: lbz:LbrM26_V2.2340 hypothetical protein; SPTR: Putative uncharacterized protein. (97 aa)    
Predicted Functional Partners:
ADW17759.1
Peptidase M15A; COGs: COG3108 conserved hypothetical protein; InterPro IPR013230; KEGG: sfu:Sfum_2869 hypothetical protein; PFAM: Peptidase M15A; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882).
       0.547
ADW17761.1
COGs: COG1643 HrpA-like helicase; InterProIPR010222: IPR014001: IPR003593: IPR001650: IPR 007502: IPR011709: IPR014021; KEGG: dak:DaAHT2_0729 ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein; SPTR: ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TI [...]
       0.506
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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