Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADW17814.1 | ADW17815.1 | Despr_1662 | Despr_1663 | KEGG: dps:DP2777 gliding motility regulatory protein (MglB); SPTR: Related to gliding motility regulatory protein (MglB); PFAM: Roadblock/LC7 domain. | Gliding motility protein (MglA); COGs: COG2229 GTPase; InterPro IPR001806; KEGG: dps:DP2776 gliding motility protein (MglA); SPTR: Probable gliding motility protein (MglA); PFAM: Ras family; TIGRFAM: small GTP-binding protein domain. | 0.999 |
ADW17814.1 | ADW17816.1 | Despr_1662 | Despr_1664 | KEGG: dps:DP2777 gliding motility regulatory protein (MglB); SPTR: Related to gliding motility regulatory protein (MglB); PFAM: Roadblock/LC7 domain. | KEGG: dps:DP2775 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.571 |
ADW17815.1 | ADW17814.1 | Despr_1663 | Despr_1662 | Gliding motility protein (MglA); COGs: COG2229 GTPase; InterPro IPR001806; KEGG: dps:DP2776 gliding motility protein (MglA); SPTR: Probable gliding motility protein (MglA); PFAM: Ras family; TIGRFAM: small GTP-binding protein domain. | KEGG: dps:DP2777 gliding motility regulatory protein (MglB); SPTR: Related to gliding motility regulatory protein (MglB); PFAM: Roadblock/LC7 domain. | 0.999 |
ADW17815.1 | ADW17816.1 | Despr_1663 | Despr_1664 | Gliding motility protein (MglA); COGs: COG2229 GTPase; InterPro IPR001806; KEGG: dps:DP2776 gliding motility protein (MglA); SPTR: Probable gliding motility protein (MglA); PFAM: Ras family; TIGRFAM: small GTP-binding protein domain. | KEGG: dps:DP2775 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.713 |
ADW17816.1 | ADW17814.1 | Despr_1664 | Despr_1662 | KEGG: dps:DP2775 hypothetical protein; SPTR: Putative uncharacterized protein. | KEGG: dps:DP2777 gliding motility regulatory protein (MglB); SPTR: Related to gliding motility regulatory protein (MglB); PFAM: Roadblock/LC7 domain. | 0.571 |
ADW17816.1 | ADW17815.1 | Despr_1664 | Despr_1663 | KEGG: dps:DP2775 hypothetical protein; SPTR: Putative uncharacterized protein. | Gliding motility protein (MglA); COGs: COG2229 GTPase; InterPro IPR001806; KEGG: dps:DP2776 gliding motility protein (MglA); SPTR: Probable gliding motility protein (MglA); PFAM: Ras family; TIGRFAM: small GTP-binding protein domain. | 0.713 |