STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17830.1Flavodoxin/nitric oxide synthase; InterPro IPR008254; KEGG: sat:SYN_01229 flavodoxin; PFAM: flavodoxin/nitric oxide synthase; SPTR: Flavodoxin; PFAM: NADPH-dependent FMN reductase. (151 aa)    
Predicted Functional Partners:
nifU
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.666
ADW19438.1
COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462: IPR002742: IPR004793; KEGG: dma:DMR_17610 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; SPTR: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.
  
  
 0.540
ADW17834.1
Hypothetical protein; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: cpr:CPR_1247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.470
ADW17910.1
Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain protein; COGs: COG2199 FOG: GGDEF domain; InterProIPR000014: IPR000160: IPR012827: IPR001610: IPR 013767: IPR012312: IPR000700: IPR016131; KEGG: asa:ASA_2981 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; Hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: GGDEF domain protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; hemerythrin-like metal-bindi [...]
  
  
 0.458
ADW18663.1
COGs: COG2199 FOG: GGDEF domain; InterProIPR000014: IPR000160: IPR012827: IPR013656: IPR 012312; KEGG: tau:Tola_1998 diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; Hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain; TIGRFAM: diguanylate cyclase; PAS sensor protein; hemerythrin-like metal-binding protein; PFAM: GGDEF domain; PAS fold; [...]
  
  
 0.455
ADW17831.1
Protein of unknown function DUF190; InterPro IPR003793; KEGG: rfr:Rfer_1947 hypothetical protein; PFAM: protein of unknown function DUF190; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1993.
       0.443
ADW17296.1
COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR017220: IPR005117: IPR006067: IPR006066; KEGG: dae:Dtox_1606 nitrite and sulphite reductase 4Fe-4S region; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 0.433
ADW17832.1
Camphor resistance protein CrcB; COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: tau:Tola_2564 CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein crcB homolog; TIGRFAM: CrcB protein; manually curated; PFAM: CrcB-like protein; TIGRFAM: crcB protein.
       0.428
ADW17833.1
KEGG: cno:NT01CX_0217 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.428
ADW17418.1
DGC domain protein; COGs: COG4273 conserved hypothetical protein; InterPro IPR014958; KEGG: dps:DP0947 hypothetical protein; PFAM: DGC domain protein; SPTR: Putative uncharacterized protein; PFAM: DGC domain.
   
    0.415
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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